rs198652 chr6:142845714 G>A
- Sequence
ccaggcttaaatcaaatgaaggtc[G/A]atgcaatgtccccagaggaagctg
- ASB in cell types
- 22RV1 (prostate carcinoma) breast tumor
- ASB for transcription factors
- ANDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 3.25 | 0.03 | 1.50 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP alzheimers disease, asthma, bipolar disorder, birth weight, partial epilepsy, resistance to kuru in aged women despite likely exposure, salmonella-induced pyroptosis, serum creatinine, stabilized warfarin dose, waist hip ratio