rs1994323 chr11:12080204 A>C

Sequence
cacaaagttatataaccttgatca[A/C]agcttgggagggaaaaacgtcatc
ASB in cell types
A549 (lung carcinoma)
ASB for transcription factors
JUN_HUMAN GCR_HUMAN SP7_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
JUN_HUMAN 0.26 1.51 1.001.1·10-4 1.81 n/a No Hit
GCR_HUMAN 0.56 1.06 1.000.01 1.47 n/a No Hit
SP7_HUMAN -2.24 2.50 1.000.02 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP alzheimers disease arthritis including non-rheumatoid hdl cholesterol change with statins mitral annular calcium rheumatoid arthritis
GTEx eQTL Artery_Aorta Artery_Coronary Artery_Tibial Cells_Cultured_fibroblasts Prostate Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg

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