rs199693956 chr6:166259176 T>G
- Sequence
ctccaagctttcgaaacttttttt[T/G]tttttttaattgagacagagcctc
- ASB in cell types
- K562 (myelogenous leukemia) Kasumi-1 (acute myeloblastic leukemia) SEM (childhood B acute lymphoblastic leukemia)
- ASB for transcription factors
- ATF3_HUMAN MTG8_HUMAN SMCE1_HUMAN ERG_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ATF3_HUMAN | -1.76 | 2.21 | 1.00 | n/a | No Hit | |||
| MTG8_HUMAN | -0.97 | 1.55 | 1.50 | n/a | n/a | |||
| SMCE1_HUMAN | n/a | 2.59 | 1.00 | n/a | n/a | |||
| ERG_HUMAN | -2.45 | 2.48 | 1.33 | n/a | No Hit | |||
| SKIL_HUMAN | n/a | 2.49 | 1.00 | n/a | n/a |
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