rs2005057 chr15:78740683 G>C
- Sequence
agcggggcaggaacaccgttcatg[G/C]agcaggcggtgaggcatgtaccta
- ASB in cell types
- HeLa (cervical adenocarcinoma) HeLa S3 (cervical adenocarcinoma) GM17942 (lymphoblastoid cell) epithelial cell of proximal tubule
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 2.25 | -0.83 | 2.35 | 3.56 | Discordant |
Items per page:
1 – 1 of 1
Motif analysis
