rs200614524 chr16:46388253 T>C
- Sequence
ggctagaatggaatcatctttgaa[T/C]ggaatcaaatggaatcatcatcga
- ASB in cell types
- HEK293 (embryonic kidney) SUP-B15 (Childhood B acute lymphoblastic leukemia) HCC-1599(ductal breast carcinoma) CD4+ T cells from blood
- ASB for transcription factors
- TF65_HUMAN SUH_HUMAN GCR_HUMAN OGG1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TF65_HUMAN | 1.62 | 0.52 | 2.15 | n/a | No Hit | |||
| SUH_HUMAN | 2.36 | -4.14 | 1.50 | n/a | No Hit | |||
| GCR_HUMAN | -1.43 | 1.82 | 3.00 | n/a | No Hit | |||
| OGG1_HUMAN | 1.40 | -0.21 | 2.00 | n/a | n/a |
Items per page:
1 – 4 of 4