rs200702652 chr19:16316205 G>T

Sequence
cacttgcagagggtgcctctgccc[G/T]tatctctccgcatcctcaagaaac
ASB in cell types
HCASMC (Human coronary artery smooth muscle cells) CD34+ bone marrow cell-derived erythroid progenitors
ASB for transcription factors
TCF21_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
TCF21_HUMAN 1.32 n/a 1.4·10-111.00 2.50 n/a n/a
Items per page:
1 – 1 of 1

Motif analysis

No data available

Genetic associations

GTEx eQTL Brain_Anterior_cingulate_cortex_BA24 Testis

Download