rs201574834 chr6:139292082 G>A
- Sequence
acacatacacacgtgcacgcacgc[G/A]cgcgcacacacacacacacacaca
- ASB in cell types
- Th1-cells MS-1 (Small cell lung carcinoma) activated primary CD4+ T cells from blood GM12890 (Lymphoblastoid Cell Lines)
- ASB for transcription factors
- TBX21_HUMAN NFAC2_HUMAN STAG1_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TBX21_HUMAN | 3.49 | -2.91 | 1.00 | n/a | No Hit | |||
| NFAC2_HUMAN | 3.08 | -5.59 | 2.00 | n/a | No Hit | |||
| STAG1_HUMAN | 0.40 | 2.75 | 1.08 | n/a | n/a |
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