rs201752355 chr10:96641120 T>C
- Sequence
tgtgtgtgtgtgtgtgtgtgtgtg[T/C]gtgtgcgtgtgcatgtatacaccc
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) foreskin keratinocyte bipolar neuron ID00014 (lymphoblastoid cell, DiGeorge syndrome)
- ASB for transcription factors
- CTCF_HUMAN IKZF2_HUMAN IKZF1_HUMAN SMCA5_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 2.12 | 0.50 | 1.55 | n/a | No Hit | |||
| IKZF2_HUMAN | 3.77 | -3.65 | 1.00 | n/a | n/a | |||
| IKZF1_HUMAN | 2.66 | -2.78 | 1.25 | n/a | No Hit | |||
| SMCA5_HUMAN | 3.41 | -3.40 | 1.00 | n/a | No Hit | |||
| SRF_HUMAN | 3.05 | n/a | 1.00 | n/a | No Hit |
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