rs202093 chr13:30240781 T>C

Sequence
tgtcagttacacatcaacttcaaa[T/C]taacatgtaaaatgtccttggtta
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
PKNX1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
PKNX1_HUMAN 0.13 1.75 1.003.0·10-3 1.50 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP advanced age-related macular degeneration (choroidal neovascularization) vs. no amd fasting insulin homa-ir hypertension (early onset hypertension) partial epilepsy variant creutzfeldt-jakob disease
GTEx eQTL Nerve_Tibial Testis

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