rs2023292 chr2:43169000 T>C

Sequence
tcccacaccctgctcatttttttt[T/C]tctctctctctctctctctctcac
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
CTCF_HUMAN TRI22_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 1.74 -0.21 4.2·10-41.00 1.00 n/a No Hit
TRI22_HUMAN 2.82 n/a 4.4·10-31.00 1.00 n/a n/a
Items per page:
1 – 2 of 2

Motif analysis

No data available

Genetic associations

No data available

Download