rs2023509 chr20:17505191 C>T

Sequence
ggggctcttacgggtatatgtgca[C/T]ttatttgaaggagaggcttccagc
ASB for transcription factors
CTCF_HUMAN
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View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 0.67 1.03 1.003.0·10-4 1.18 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP advanced age-related macular degeneration (choroidal neovascularization) vs. no amd,  comorbid depressive syndrome and alcohol dependence,  hdl cholesterol,  partial epilepsy,  sporadic creutzfeldt-jakob disease
GTEx eQTL Brain_Caudate_basal_ganglia,  Whole_Blood

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