rs202511 chr20:1722460 T>C

Sequence
agtggtcaaacctccagctgtgac[T/C]gacactgacttctcaggctgaatc
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
COT1_HUMAN SKIL_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
COT1_HUMAN 1.72 -1.52 0.021.00 1.00 n/a No Hit
SKIL_HUMAN 2.63 -2.25 0.021.00 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GTEx eQTL Adipose_Visceral_Omentum

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