ADASTRA v5.1.3
Search
Browse
Annotate
Help
Downloads
About
rs202511
chr20:1722460
T
>
C
Sequence
agtggtcaaacctccagctgtgac[T/C]gacactgacttctcaggctgaatc
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
COT1_HUMAN
SKIL_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
Reset
hidden submit
Filter
Get TSV
Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
COT1_HUMAN
1.72
-1.52
0.02
1.00
1.00
n/a
No Hit
SKIL_HUMAN
2.63
-2.25
0.02
1.00
1.00
n/a
n/a
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GTEx eQTL
Adipose_Visceral_Omentum
Download
Download page in JSON
Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
Please enable JavaScript to continue using this application.
Switch release
SNP set annotation with ANANASTRA
Sort
+/-100bp
log2-scale
log2(Alt/Ref motif p-value)