rs2027228 chr13:34157744 G>A
- Sequence
tggagacagcgagcttctcagaga[G/A]cagcttttctgcaactcatggagg
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- ESR1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ESR1_HUMAN | -0.04 | 2.67 | 2.75 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP hdl cholesterol, late onset alzheimers disease, major depressive disorder, obesity with early age of onset (age >2)