rs203833 chr1:167876803 T>C
- Sequence
tggactcagccttgtgaatgcttt[T/C]gtcaatggactatctgcaaacata
- ASB in cell types
- liver
- ASB for transcription factors
- HNF4A_HUMAN SP1_HUMAN RXRA_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| HNF4A_HUMAN | -1.63 | 1.82 | 1.25 | n/a | No Hit | |||
| SP1_HUMAN | -0.90 | 2.29 | 1.25 | n/a | No Hit | |||
| RXRA_HUMAN | -1.30 | 1.74 | 1.25 | n/a | No Hit |
Items per page:
1 – 3 of 3
Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Visceral_Omentum, Artery_Aorta, Artery_Tibial, Colon_Sigmoid, Colon_Transverse, Esophagus_Muscularis, Lung, Muscle_Skeletal, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Stomach, Testis, Thyroid