ADASTRA v5.1.3
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Bill Cipher
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rs2040
chr16:11182056
C
>
T
Sequence
ctcgatgcctctgagcctcgggac[C/T]gctctagggaagtacctgctttcg
ASB in cell types
CD14+ monocytes
MDM(monocyte derived macrophages)
ASB for transcription factors
STAT1_HUMAN
TF65_HUMAN
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View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
STAT1_HUMAN
1.72
-3.86
2.0·10
-3
1.00
2.00
n/a
No Hit
TF65_HUMAN
1.88
n/a
0.02
1.00
2.00
n/a
No Hit
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5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GRASP
hip bone mineral density (bmd)
GTEx eQTL
Artery_Tibial
,
Brain_Cerebellar_Hemisphere
,
Brain_Cerebellum
,
Nerve_Tibial
,
Thyroid
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)