rs2041220 chr19:38335544 T>A
- Sequence
gagcgaaactccgtctcaaaaaaa[T/A]atatatatatatatatttgggtag
- ASB in cell types
- GM02630 (Fanconi anemi) neural progenitors 22RV1 (prostate carcinoma) GM19239 (male B-cells lymphoblastoid cell line)
- ASB for transcription factors
- STAG1_HUMAN RAD21_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAG1_HUMAN | 0.54 | 2.68 | 1.14 | n/a | n/a | |||
| RAD21_HUMAN | 0.76 | 0.88 | 1.11 | n/a | n/a |
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