rs2061449 chr18:63075255 C>G
- Sequence
cgccactgaaatgacagcggctcc[C/G]ggagacgcgcagccagccagctcc
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) 22RV1 (prostate carcinoma)
- ASB for transcription factors
- IKZF2_HUMAN IKZF1_HUMAN MEF2B_HUMAN ANDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF2_HUMAN | -2.13 | 3.15 | 1.00 | n/a | n/a | |||
| IKZF1_HUMAN | 0.08 | 2.75 | 1.28 | n/a | No Hit | |||
| MEF2B_HUMAN | -5.17 | 3.19 | 1.50 | n/a | No Hit | |||
| ANDR_HUMAN | 2.04 | -0.60 | 1.88 | n/a | No Hit |
Items per page:
1 – 4 of 4