ADASTRA v5.1.3
Search
Browse
Annotate
Help
Downloads
About
rs206786
chr6:32967402
A
>
C
Sequence
ggggatggggaaagagaatgtgac[A/C]aagaattgagatagtaaggataat
ASB in cell types
K562 (myelogenous leukemia)
GM12878 (female B-cells lymphoblastoid cell line)
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
A
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
Selected columns
Reset
hidden submit
Filter
Get TSV
Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
K562 (myelogenous leukemia)
0.94
0.44
4.7·10
-9
1.00
2.98
GM12878 (female B-cells lymphoblastoid cell line)
0.84
1.08
0.59
0.02
1.09
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GRASP
homa-b
,
rheumatoid arthritis
,
waist hip ratio
GTEx eQTL
Adipose_Subcutaneous
,
Brain_Cerebellar_Hemisphere
,
Brain_Cerebellum
,
Cells_Cultured_fibroblasts
,
Esophagus_Muscularis
,
Skin_Sun_Exposed_Lower_leg
,
Thyroid
Download
Download page in JSON
Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
Please enable JavaScript to continue using this application.
Switch release
SNP set annotation with ANANASTRA
Sort
+/-100bp
log2-scale