rs2071839 chr22:37486521 T>C

Sequence
cagcagaaagggcagccccggctc[T/C]gccagctgctgcggtgggaggaag
ASB in cell types
CD14+ monocytes macrophages form periferal blood
ASB for transcription factors
STAT1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
STAT1_HUMAN 3.38 -0.23 3.0·10-41.00 1.50 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP comorbid depressive syndrome and alcohol dependence
GTEx eQTL Brain_Nucleus_accumbens_basal_ganglia Esophagus_Mucosa Muscle_Skeletal Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Whole_Blood

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