rs207217 chr7:130875564 C>T
- Sequence
aggggcccctggaggaggagcggc[C/T]gagatggctcattcttgagccttt
- ASB in cell types
- MCF7L-P(immortalized breast epithelial cell line) GM18526 (B – cells Lymphoblastoid Cell Lines) HeLa S3 (cervical adenocarcinoma) MS-1 (Small cell lung carcinoma)
- ASB for transcription factors
- CTCF_HUMAN RAD21_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.42 | 0.95 | 1.53 | n/a | No Hit | |||
| RAD21_HUMAN | 0.28 | 1.17 | 1.37 | n/a | n/a |
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