rs2073195 chr20:2652486 A>G
- Sequence
aaggcccgctcgcccgcgctcggc[A/G]ccacccagcccgcgctccgggcga
- ASB in cell types
- HCASMC (Human coronary artery smooth muscle cells) HCT-116 (colon carcinoma) WA01 (H1, human embryonic stem cells) primary B-CLL cells
- ASB for transcription factors
- TCF21_HUMAN TBP_HUMAN MED26_HUMAN NR2C1_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TCF21_HUMAN | n/a | 3.92 | 2.00 | n/a | n/a | |||
| TBP_HUMAN | 0.29 | 1.28 | 1.06 | n/a | No Hit | |||
| MED26_HUMAN | 1.64 | -1.01 | 1.00 | n/a | n/a | |||
| NR2C1_HUMAN | -2.45 | 2.39 | 1.00 | n/a | No Hit | |||
| TBX21_HUMAN | 1.53 | -0.69 | 1.00 | n/a | No Hit |
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