rs2075151 chr16:11916277 G>T
- Sequence
cggcggccccacctgtcacctggt[G/T]ggggggcagcggcaggccctggtt
- ASB in cell types
- HepG2 (hepatoblastoma) GM02255 (Lymphoblastoid Cell Lines)
- ASB for transcription factors
- CTCF_HUMAN RFOX2_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 2.20 | -0.36 | 1.11 | -4.77 | Concordant | |||
| RFOX2_HUMAN | -0.90 | 1.52 | 3.00 | n/a | n/a |
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Motif analysis
