ADASTRA v5.1.3
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rs208345
chr7:2760492
A
>
G
Sequence
ggcccttctgcctgtcaaatcaac[A/G]ccgtggcttcacttccttctgggc
ASB in cell types
CTV-1 (Adult T acute lymphoblastic leukemia)
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
A
) ASB
-log10 FDR of Alt (
G
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
Selected columns
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
CTV-1 (Adult T acute lymphoblastic leukemia)
0.30
0.99
0.92
7.2·10
-3
1.00
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
height
,
ldl cholesterol change with statins
,
triglycerides change with statins
GTEx eQTL
Adipose_Subcutaneous
,
Artery_Aorta
,
Artery_Tibial
,
Cells_Cultured_fibroblasts
,
Colon_Sigmoid
,
Colon_Transverse
,
Esophagus_Gastroesophageal_Junction
,
Esophagus_Mucosa
,
Esophagus_Muscularis
,
Heart_Atrial_Appendage
,
Heart_Left_Ventricle
,
Lung
,
Nerve_Tibial
,
Skin_Sun_Exposed_Lower_leg
,
Stomach
,
Testis
,
Thyroid
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale