rs208827 chr15:89399100 C>G
- Sequence
aataatcaggacttactgtgccag[C/G]cactattctaagtgctagtttgtg
- ASB in cell types
- 22RV1 (prostate carcinoma) RWPE2
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| 22RV1 (prostate carcinoma) | 2.33 | 0.71 | 1.50 | |||
| RWPE2 | -1.96 | 2.24 | 1.00 |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Brain_Caudate_basal_ganglia, Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Brain_Hippocampus, Brain_Hypothalamus, Brain_Nucleus_accumbens_basal_ganglia, Colon_Sigmoid, Colon_Transverse, Esophagus_Muscularis, Testis, Thyroid