ADASTRA v5.1.3
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rs209485
chr6:53309650
T
>
C
Sequence
cagaataaagcaaaagggatggta[T/C]gtcgcttctgggattaggtgataa
ASB in cell types
TMD8 (diffuse large B-cell lymphoma)
ASB for transcription factors
ITF2_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ITF2_HUMAN
0.05
2.24
1.00
0.01
1.83
n/a
No Hit
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
diabetic retinopathy in type 2 diabetes mellitus
,
hdl cholesterol
,
normal tension glaucoma
,
simpson-angus scale
GTEx eQTL
Adipose_Subcutaneous
,
Brain_Caudate_basal_ganglia
,
Brain_Putamen_basal_ganglia
,
Thyroid
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)