ADASTRA v5.1.3
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rs209920
chr1:40315317
G
>
A
Sequence
ccccacaaggaggggaaaggagag[G/A]agggggatgaggcctcgctgtgag
ASB in cell types
foreskin keratinocyte
GSC23 (Glioblastoma)
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View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
foreskin keratinocyte
0.77
n/a
7.6·10
-3
1.00
3.00
GSC23 (Glioblastoma)
2.06
n/a
0.03
1.00
3.00
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Motif analysis
No data available
Genetic associations
GTEx eQTL
Adipose_Subcutaneous
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale