rs2106607 chr17:69894695 A>G

Sequence
gatttcccatttattgttccccaa[A/G]cagagtgacggtgcaagttttatt
ASB in cell types
K562 (myelogenous leukemia)
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View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
K562 (myelogenous leukemia) -0.78 1.51 1.000.04 2.00
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Motif analysis

No data available

Genetic associations

GRASP college completion,  hdl cholesterol change with statins,  height
GTEx eQTL Adipose_Visceral_Omentum,  Brain_Frontal_Cortex_BA9,  Brain_Hypothalamus,  Cells_Cultured_fibroblasts,  Colon_Sigmoid,  Esophagus_Gastroesophageal_Junction,  Esophagus_Muscularis,  Muscle_Skeletal,  Nerve_Tibial,  Skin_Not_Sun_Exposed_Suprapubic,  Testis,  Thyroid

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