rs2107539 chr17:35995574 C>T
- Sequence
gtcaaaaaaataacatgctggtga[C/T]gctgtagagaaaaagggaacagat
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) GM12891 (male B- cells lymphoblastoid cell line)
- ASB for transcription factors
- CTCF_HUMAN IKZF1_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 2.06 | -1.80 | 1.00 | n/a | No Hit | |||
| IKZF1_HUMAN | 1.91 | -0.60 | 1.00 | n/a | No Hit |
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