rs2109781 chr7:156988795 G>A
- Sequence
acaatgatgaaaaatgatgtttgc[G/A]tggtaaaatgatgaaagggaacag
- ASB in cell types
- HepG2 (hepatoblastoma)
- ASB for transcription factors
- TBX3_HUMAN FOXA2_HUMAN RERE_HUMAN SP5_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TBX3_HUMAN | -3.11 | 3.49 | 1.00 | n/a | No Hit | |||
| FOXA2_HUMAN | -1.75 | 2.15 | 1.50 | 4.31 | Concordant | |||
| RERE_HUMAN | -2.76 | 2.85 | 1.00 | n/a | n/a | |||
| SP5_HUMAN | n/a | 3.51 | 2.00 | n/a | n/a | |||
| SKI_HUMAN | -2.33 | 2.58 | 1.00 | n/a | n/a |
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Motif analysis
