rs211300 chr10:32056210 A>G
- Sequence
catcatggcagccatggcggcggc[A/G]gcggcggcggcaccggggagagcg
- ASB in cell types
- MDA-MB-231 (breast adenocarcinoma) HepG2 (hepatoblastoma) CD14+ monocytes breast tumor
- ASB for transcription factors
- CDN1B_HUMAN STAT1_HUMAN ESR1_HUMAN JUN_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CDN1B_HUMAN | 1.66 | -0.07 | 2.00 | n/a | n/a | |||
| STAT1_HUMAN | 2.58 | 0.29 | 1.50 | n/a | No Hit | |||
| ESR1_HUMAN | 2.45 | -0.13 | 2.00 | n/a | No Hit | |||
| JUN_HUMAN | 1.35 | 0.26 | 2.00 | n/a | No Hit | |||
| BRD2_HUMAN | 1.27 | 0.42 | 1.97 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Aorta, Breast_Mammary_Tissue, Heart_Atrial_Appendage, Heart_Left_Ventricle, Muscle_Skeletal, Testis, Whole_Blood