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rs211300 chr10:32056210 A>G

Sequence
catcatggcagccatggcggcggc[A/G]gcggcggcggcaccggggagagcg
ASB in cell types
MDA-MB-231 (breast adenocarcinoma) HepG2 (hepatoblastoma) CD14+ monocytes breast tumor
ASB for transcription factors
CDN1B_HUMAN STAT1_HUMAN ESR1_HUMAN JUN_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CDN1B_HUMAN 1.66 -0.07 4.9·10-31.00 2.00 n/a n/a
STAT1_HUMAN 2.58 0.29 0.011.00 1.50 n/a No Hit
ESR1_HUMAN 2.45 -0.13 0.021.00 2.00 n/a No Hit
JUN_HUMAN 1.35 0.26 0.031.00 2.00 n/a No Hit
BRD2_HUMAN 1.27 0.42 0.041.00 1.97 n/a n/a
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Motif analysis

No data available

Genetic associations

GTEx eQTL Adipose_Subcutaneous Artery_Aorta Breast_Mammary_Tissue Heart_Atrial_Appendage Heart_Left_Ventricle Muscle_Skeletal Testis Whole_Blood

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