rs211391 chr10:32005173 G>A

Sequence
agcacatgctctgtggatccctct[G/A]ctggtcatttccgtgtctctgatg
ASB for transcription factors
SMC1A_HUMAN
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View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SMC1A_HUMAN 1.67 -0.27 0.040.95 1.33 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP homa-b,  infant head circumference,  ldl cholesterol change with statins,  total cholesterol change with statins,  years of education
GTEx eQTL Adipose_Subcutaneous,  Artery_Aorta,  Breast_Mammary_Tissue,  Heart_Atrial_Appendage,  Heart_Left_Ventricle,  Muscle_Skeletal,  Testis,  Whole_Blood

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