rs211411 chr10:32106064 T>C

Sequence
tactttacaaagcgttttcatgta[T/C]atatctctttcaacattcacaatt
ASB in cell types
HepG2 (hepatoblastoma) 22RV1 (prostate carcinoma)
ASB for transcription factors
FOXA1_HUMAN FOXA2_HUMAN CEBPA_HUMAN SP130_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
FOXA1_HUMAN -0.58 1.96 1.002.6·10-5 1.43 n/a No Hit
FOXA2_HUMAN -1.87 0.97 1.006.0·10-5 1.42 n/a No Hit
CEBPA_HUMAN 0.19 1.79 1.000.02 1.50 n/a No Hit
SP130_HUMAN -1.95 2.39 1.000.03 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP 2 hour glucose total cholesterol
GTEx eQTL Heart_Atrial_Appendage Muscle_Skeletal Skin_Not_Sun_Exposed_Suprapubic

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