rs2128244 chr11:108725450 G>A

Sequence
tcttgccagcagtgtatagagttc[G/A]agttgcatcccatcgtgtcagcac
ASB for transcription factors
SMCA5_HUMAN
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View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SMCA5_HUMAN -2.41 2.65 1.000.03 1.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP hdl cholesterol,  ldl cholesterol,  total cholesterol
GTEx eQTL Artery_Aorta,  Artery_Tibial,  Heart_Atrial_Appendage,  Nerve_Tibial,  Skin_Not_Sun_Exposed_Suprapubic,  Thyroid

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