rs2129800 chr7:136046288 C>T
- Sequence
aaaaagcaacaagctgtttctttc[C/T]cttaggcaggccagccaagagata
- ASB in cell types
- 22RV1 (prostate carcinoma)
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| 22RV1 (prostate carcinoma) | 1.59 | -3.76 | 2.00 |
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Motif analysis
No data available
Genetic associations
GRASP advanced age-related macular degeneration, birth weight, chronic kidney disease, hdl cholesterol change with statins, hypertension (early onset hypertension), sporadic creutzfeldt-jakob disease, total cholesterol change with statins