rs213022 chr1:21322122 A>G
- Sequence
ctgctgccccacctggctcatgtc[A/G]ggagctggaacaacttctgaagtc
- ASB in cell types
- neural progenitors
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.39 | 1.31 | 1.21 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP hdl cholesterol, hdl cholesterol change with statins, mitral annular calcium, rheumatoid arthritis, total cholesterol