rs213734 chr1:41110027 C>T

Sequence
acaaaaatgactctgctatcagtt[C/T]caaggtacctcgcttcttgctgct
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
ILF3_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ILF3_HUMAN -1.81 2.36 1.002.9·10-3 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP 2 hour glucose,  fasting insulin,  height,  homa-ir,  obesity with early age of onset (age >2)
GTEx eQTL Adrenal_Gland,  Brain_Caudate_basal_ganglia,  Brain_Cerebellar_Hemisphere,  Brain_Cerebellum,  Cells_Cultured_fibroblasts,  Heart_Atrial_Appendage,  Liver,  Nerve_Tibial,  Pituitary,  Skin_Sun_Exposed_Lower_leg,  Testis,  Thyroid,  Whole_Blood

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