rs2140507 chr3:852203 T>C
- Sequence
aggctccctcccatactacgggga[T/C]tcccaggcactcctcaagagctag
- ASB in cell types
- GM19193 (female B-cells Lymphoblastoid Cell Lines) NB69 (neuroblastoma) GM10847 (female B-cells Lymphoblastoid Cell Lines) GM02630 (Fanconi anemi)
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.59 | 0.26 | 1.16 | n/a | No Hit | |||
| STAG1_HUMAN | 1.33 | -0.67 | 1.17 | n/a | n/a |
Items per page:
1 – 2 of 2