rs214783 chr20:2301403 A>C
- Sequence
ttcatgaaggggagatggcttccc[A/C]tttcagggcctcagctttctgacc
- ASB in cell types
- MDM(monocyte derived macrophages) monocytes from periferal blood MV-4-11 (Childhood acute monocytic leukemia)
- ASB for transcription factors
- SPI1_HUMAN CDK9_HUMAN SRBP2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SPI1_HUMAN | 0.61 | 1.77 | 1.39 | 2.70 | Concordant | |||
| CDK9_HUMAN | -1.31 | 1.78 | 1.00 | n/a | n/a | |||
| SRBP2_HUMAN | n/a | 2.66 | 3.00 | n/a | No Hit |
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Motif analysis
