rs2154114 chr1:223712428 A>C
- Sequence
tcccggcgctcggcaggccgcagg[A/C]tggcctggtcccgggccgggagcc
- ASB in cell types
- THP-1 (acute monocytic leukemia) RKO (colon carcinoma cell)
- ASB for transcription factors
- RAD21_HUMAN CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RAD21_HUMAN | 1.16 | 0.71 | 1.12 | n/a | n/a | |||
| CTCF_HUMAN | 0.77 | 0.76 | 1.09 | -3.37 | Discordant |
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Motif analysis
