rs2154637 chr8:100474273 G>A

Sequence
ggtcagagtgacaggaaagttgca[G/A]tgagcaatagatgtgaccagaggg
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
MEF2B_HUMAN IKZF1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
MEF2B_HUMAN -1.15 1.15 1.003.4·10-4 1.00 n/a No Hit
IKZF1_HUMAN -1.18 1.35 1.000.02 1.25 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP amyotrophic lateral sclerosis (als) age of onset major depressive disorder (broad definition) major depressive disorder (broad definition) (females) major depressive disorder (broad definition) (males) spine bone mineral density (bmd) transmission distortion

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