rs2159133 chr19:1109214 A>G
- Sequence
ccttggcctcctccgcggtgacct[A/G]gggacacagggccgcatgagcctg
- ASB in cell types
- HS-SY-2(Monophasic synovial sarcoma)
- ASB for transcription factors
- KDM2B_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| KDM2B_HUMAN | 3.30 | n/a | 2.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adrenal_Gland, Brain_Cerebellum, Brain_Cortex, Brain_Hippocampus, Colon_Transverse, Esophagus_Mucosa, Muscle_Skeletal, Pancreas, Thyroid, Whole_Blood