rs216152 chr16:15821963 A>G
- Sequence
gacagatacctgactccaggagcc[A/G]tcactttacaacctgagattacag
- ASB in cell types
- HeLa (cervical adenocarcinoma) MCF10A (breast epithelial cells) LUHMES (lund human mesencephalic cells) OCI-LY7 (diffuse large B-cell lymphoma)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.22 | 0.49 | 1.59 | 0.30 | Weak Discordant |
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Motif analysis
