rs216364 chr9:33818259 T>C
- Sequence
gagggtgggtggaaagagcggtgg[T/C]ctatctgtgctttttcgttctccg
- ASB in cell types
- liver 22RV1 (prostate carcinoma)
- ASB for transcription factors
- HNF4A_HUMAN ANDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| HNF4A_HUMAN | -1.62 | 1.97 | 1.25 | n/a | No Hit | |||
| ANDR_HUMAN | 1.99 | -0.19 | 2.33 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP hypertriglyceridemia, ldl cholesterol, parkinsons disease, serum creatinine, total cholesterol
GTEx eQTL Adipose_Subcutaneous, Brain_Caudate_basal_ganglia, Brain_Cortex, Brain_Frontal_Cortex_BA9, Brain_Nucleus_accumbens_basal_ganglia, Cells_Cultured_fibroblasts, Esophagus_Muscularis, Pancreas, Testis