rs2166631 chr10:71713125 C>T
- Sequence
ttcagagtagcggggagaaagaga[C/T]gtcacaatttcccggaaaggagtt
- ASB in cell types
- K562 (myelogenous leukemia) MOLT-4 (Adult T acute lymphoblastic leukemia)
- ASB for transcription factors
- RING2_HUMAN BRD4_HUMAN MGAP_HUMAN SPT5H_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RING2_HUMAN | 3.32 | -3.46 | 1.00 | n/a | n/a | |||
| BRD4_HUMAN | 1.36 | -0.73 | 1.00 | n/a | n/a | |||
| MGAP_HUMAN | 2.56 | -2.23 | 1.00 | n/a | n/a | |||
| SPT5H_HUMAN | 1.85 | -0.47 | 1.00 | n/a | n/a | |||
| ATF1_HUMAN | 2.47 | n/a | 1.00 | -6.41 | Concordant |
Items per page:
1 – 5 of 7
Motif analysis
