ADASTRA v5.1.3
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rs217070
chr11:88334226
T
>
C
Sequence
caatttacttgaaccatttaatat[T/C]tagcttacaagaaaagttccagct
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)
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View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
Selected columns
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
GM12878 (female B-cells lymphoblastoid cell line)
0.48
1.01
1.00
2.7·10
-3
1.00
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
infant head circumference
,
ldl cholesterol
,
ldl cholesterol change with statins
,
total cholesterol
,
triglycerides
GTEx eQTL
Whole_Blood
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale