rs2173763 chr3:122610313 A>G
- Sequence
ccttaatgtctaagttttggaagt[A/G]acctcatcatggtgtttcagtgct
- ASB in cell types
- BEAS-2B (bronchial epithelium) MOLM14 (Adult acute myeloid leukemia) GM12878 (female B-cells lymphoblastoid cell line) primary human Th1 T cells
- ASB for transcription factors
- ATF7_HUMAN GCR_HUMAN CDK8_HUMAN ATF2_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ATF7_HUMAN | n/a | 1.58 | 1.50 | n/a | n/a | |||
| GCR_HUMAN | 0.64 | 2.41 | 1.00 | n/a | No Hit | |||
| CDK8_HUMAN | -2.76 | 2.87 | 1.00 | n/a | n/a | |||
| ATF2_HUMAN | -0.57 | 3.07 | 1.00 | 5.20 | Concordant | |||
| IKZF2_HUMAN | 1.01 | -0.48 | 1.00 | n/a | n/a |
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Motif analysis
