rs2181408 chr1:193109855 G>T
- Sequence
caaactggataattggatctcctt[G/T]gttctgcagaagctttctggcctt
- ASB in cell types
- HepG2 (hepatoblastoma) LNCaP C4-2 (prostate carcinoma)
- ASB for transcription factors
- MIXL1_HUMAN BRD4_HUMAN ZN644_HUMAN TEAD3_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| MIXL1_HUMAN | -4.01 | 4.06 | 1.00 | n/a | n/a | |||
| BRD4_HUMAN | n/a | 3.00 | 1.00 | n/a | n/a | |||
| ZN644_HUMAN | n/a | 2.84 | 1.00 | n/a | n/a | |||
| TEAD3_HUMAN | -1.86 | 2.31 | 1.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Artery_Aorta, Cells_Cultured_fibroblasts, Esophagus_Muscularis, Heart_Atrial_Appendage, Heart_Left_Ventricle, Muscle_Skeletal, Pituitary, Small_Intestine_Terminal_Ileum, Spleen