rs218471 chr20:58652667 C>G
- Sequence
ccgcccgttttcttttaacggccc[C/G]gcagccctctgtgtggccttgttc
- ASB in cell types
- primary B-CLL cells adult erythroblasts CD14+ monocytes HEK293 (embryonic kidney)
- ASB for transcription factors
- RBBP5_HUMAN STAT1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RBBP5_HUMAN | 1.54 | n/a | 3.00 | n/a | n/a | |||
| STAT1_HUMAN | 1.78 | -0.32 | 1.75 | n/a | No Hit |
Items per page:
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Visceral_Omentum, Cells_Cultured_fibroblasts, Esophagus_Mucosa, Nerve_Tibial, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Testis, Whole_Blood