rs220266 chr21:42063288 G>C
- Sequence
gcaggggtgcagggggctgccact[G/C]agcccgctgcacagggtgacctgg
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) monocyte-derived dendritic cells MOLT-4 (Adult T acute lymphoblastic leukemia)
- ASB for transcription factors
- PKNX1_HUMAN SPI1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| PKNX1_HUMAN | n/a | 3.38 | 1.33 | 4.60 | Concordant | |||
| SPI1_HUMAN | 0.01 | 1.72 | 1.67 | n/a | No Hit |
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Motif analysis
