rs220519 chr20:38650612 C>T
- Sequence
ttgtaatatgatataatatgtaaa[C/T]gtaattgtttaaacagtaaaggca
- ASB in cell types
- LNCaP (prostate carcinoma) LHSAR (prostate epithelial cells)
- ASB for transcription factors
- ANDR_HUMAN FOXA1_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 2.38 | 0.33 | 1.80 | n/a | No Hit | |||
| FOXA1_HUMAN | 2.08 | -1.26 | 1.50 | n/a | No Hit |
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